STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103704877Uncharacterized protein LOC103704877. (153 aa)    
Predicted Functional Partners:
LOC103705784
Nuclear transcription factor Y subunit A-6-like.
    
 0.628
LOC103708639
Nuclear transcription factor Y subunit A-3-like.
    
 0.628
LOC103702864
Nuclear transcription factor Y subunit B-like isoform X1.
   
 0.627
LOC103708890
Nuclear transcription factor Y subunit B-like.
   
 0.627
LOC103718134
Nuclear transcription factor Y subunit B-like isoform X1.
   
 0.627
LOC103697695
Nuclear transcription factor Y subunit A-1-like isoform X1.
    
 0.563
LOC103698255
Nuclear transcription factor Y subunit A-9-like.
    
 0.563
LOC103705719
Nuclear transcription factor Y subunit A-10-like.
    
 0.563
LOC103707866
Nuclear transcription factor Y subunit A-1.
    
 0.563
LOC103710501
Nuclear transcription factor Y subunit A-7-like.
    
 0.563
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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