STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103704998UV radiation resistance-associated gene protein isoform X1. (357 aa)    
Predicted Functional Partners:
LOC103715072
Beclin-1-like protein.
    
 0.964
LOC103724252
Serine/threonine-protein kinase VPS15 isoform X1.
    
 0.958
LOC103702001
Phosphatidylinositol 3-kinase, root isoform isoform X1; Belongs to the PI3/PI4-kinase family.
    
 0.941
LOC103711530
Phosphatidylinositol 3-kinase, root isoform-like; Belongs to the PI3/PI4-kinase family.
    
 0.941
LOC103708169
Uncharacterized protein LOC103708169.
    
 
 0.730
LOC103708166
Uncharacterized protein LOC103708166.
    
 
 0.565
LOC103718327
Uncharacterized protein LOC103718327.
    
 
 0.565
LOC103722345
Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family.
    
 
 0.508
LOC103697397
Autophagy-related protein.
     
 0.486
LOC103705136
Autophagy-related protein.
     
 0.486
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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