STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103705350Malate dehydrogenase. (356 aa)    
Predicted Functional Partners:
LOC103707010
Aspartate aminotransferase.
   
 0.975
LOC103706860
Aspartate aminotransferase.
   
 0.974
LOC103707932
Fumarate hydratase 1, mitochondrial-like.
  
 0.974
LOC103711440
LOW QUALITY PROTEIN: fumarate hydratase 1, mitochondrial-like.
  
 0.974
LOC103715867
Malate synthase, glyoxysomal.
   
 0.970
LOC103712115
Malic enzyme.
  
 0.960
LOC103705497
Malate dehydrogenase [NADP] 1, chloroplastic.
   
 0.954
LOC103704635
Malic enzyme.
  
 0.953
LOC103710265
Citrate synthase.
  
 0.944
LOC103723409
Citrate synthase.
  
 0.944
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.