STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103705414Membralin-like protein At1g60995 isoform X1. (668 aa)    
Predicted Functional Partners:
LOC103716539
ER membrane protein complex subunit 1.
      
 0.518
LOC103721388
Uncharacterized protein LOC103721388 isoform X1.
      
 0.516
LOC103713528
peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase.
      
 0.506
LOC103695695
Uncharacterized protein LOC103695695.
  
   
 0.451
LOC103711886
Uncharacterized protein LOC103711886.
      
 0.422
LOC103721143
Uncharacterized protein LOC103721143 isoform X1.
      
 0.422
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.