STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103705396Protein WHAT'S THIS FACTOR 1 homolog. (393 aa)    
Predicted Functional Partners:
LOC103719806
Zinc finger protein 511 isoform X1.
      
 0.579
LOC103716761
Methyltransferase-like protein 5.
      
 0.578
LOC103695916
Pentatricopeptide repeat-containing protein At4g18975, chloroplastic.
      
 0.570
LOC103701091
Uncharacterized protein LOC103701091.
      
 0.569
LOC103704841
Uncharacterized protein C57A10.07-like isoform X1.
      
 0.519
LOC103711049
Uncharacterized protein C57A10.07.
      
 0.519
LOC103713014
Carbon catabolite repressor protein 4 homolog 4 isoform X1.
      
 0.517
LOC103722156
Protein WHAT'S THIS FACTOR 1 homolog.
      
0.517
LOC103715594
Glyoxylate/succinic semialdehyde reductase 1.
      
 0.516
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.