STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103705738Cullin-4-like isoform X1; Belongs to the cullin family. (871 aa)    
Predicted Functional Partners:
LOC103696820
DNA damage-binding protein 1a isoform X1.
  
 0.977
LOC103706899
Denticleless protein homolog isoform X1.
    
 0.972
LOC113461348
Uncharacterized protein LOC113461348.
   
 0.969
LOC103706189
WD repeat-containing protein ATCSA-1-like.
    
 0.967
LOC103701991
RING-box protein 1a-like.
    
 0.959
LOC103711519
RING-box protein 1a.
    
 0.959
LOC103704802
Cullin-associated NEDD8-dissociated protein 1-like.
   
 0.948
LOC103711063
Cullin-associated NEDD8-dissociated protein 1-like.
   
 0.948
LOC103718489
Uncharacterized protein LOC103718489.
    
 0.935
LOC103721617
Uncharacterized protein LOC103721617.
    
 0.935
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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