STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103705838Paired amphipathic helix protein Sin3-like 3. (117 aa)    
Predicted Functional Partners:
LOC103714172
Protein MRG1-like.
    
 0.772
LOC103723639
Protein MRG1-like isoform X1.
    
 0.772
LOC103705548
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.755
LOC103706146
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.755
LOC103708153
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.755
LOC103709297
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.755
LOC103721325
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.755
LOC103721589
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.755
LOC113462888
Histone deacetylase 1-like.
   
 0.755
LOC103695732
Lysine-specific demethylase SE14.
   
 
 0.753
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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