STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103705809Calmodulin-like; Belongs to the calmodulin family. (149 aa)    
Predicted Functional Partners:
LOC103710739
Putative nitric oxide synthase.
     
 0.656
LOC103722298
Peptidylprolyl isomerase.
   
 0.619
LOC103717142
Uncharacterized protein LOC103717142.
   
 0.615
LOC103701425
Kinesin-like protein KIN-14I isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.607
LOC103702248
Kinesin-like protein KIN-14I isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.607
LOC103717331
DNA repair protein RAD4.
    
 0.584
LOC103703627
Dynein light chain.
   
 0.519
LOC103707225
Dynein light chain.
   
 0.519
LOC103698792
Polcalcin Phl p 7-like.
  
     0.515
LOC103709501
Two pore calcium channel protein 1 isoform X1.
    
 
 0.513
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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