STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103706050Sister chromatid cohesion protein DCC1. (402 aa)    
Predicted Functional Partners:
LOC103704175
Chromosome transmission fidelity protein 18 homolog.
   
 0.994
LOC103712107
Chromosome transmission fidelity protein 8 homolog.
   
 0.993
LOC103714160
Replication factor C subunit 4.
   
 0.981
LOC103706760
Replication factor C subunit 3.
   
 0.976
LOC103711542
Uncharacterized protein LOC103711542.
   
 0.976
LOC103723290
Replication factor C subunit 3.
   
 0.976
LOC103711812
Replication factor C subunit 3-like.
   
 0.976
LOC103719838
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.967
LOC113461293
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.967
LOC103719443
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
   
 
 0.950
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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