STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103706239Mannan endo-1,4-beta-mannosidase 8-like; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (457 aa)    
Predicted Functional Partners:
LOC103719462
Bifunctional fucokinase/fucose pyrophosphorylase isoform X1.
     
  0.800
LOC103695457
Phosphotransferase.
    
  0.663
LOC103698392
Phosphotransferase.
    
  0.663
LOC103711471
Phosphotransferase.
    
  0.663
LOC103705431
Phosphotransferase.
    
  0.663
LOC103706762
Phosphotransferase.
    
  0.663
LOC103714679
Phosphotransferase.
    
  0.663
LOC103719916
Phosphotransferase.
    
  0.663
LOC103697084
Fructokinase-2-like.
    
  0.606
LOC103706096
Fructokinase-2-like.
    
  0.606
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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