STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103706341PI-PLC X-box domain-containing protein DDB_G0293730. (318 aa)    
Predicted Functional Partners:
LOC103708911
RNA-binding protein 28 isoform X1.
      
 0.515
LOC103697924
Glycerol-3-phosphate acyltransferase 5-like.
  
     0.464
LOC103698694
Glycerol-3-phosphate 2-O-acyltransferase 4-like.
  
    0.456
LOC103704152
Glycerol-3-phosphate acyltransferase 5-like.
  
     0.456
LOC103720612
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
      
 0.444
LOC103704045
Glycerol-3-phosphate 2-O-acyltransferase 6.
  
     0.443
LOC103702373
Ribonuclease E/G-like protein, chloroplastic isoform X1.
      
 0.431
LOC103707613
Maf-like protein DDB_G0281937 isoform X1.
      
 0.431
LOC103707614
Maf-like protein DDB_G0281937.
      
 0.431
LOC103719324
Probable glycerol-3-phosphate acyltransferase 3.
  
     0.417
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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