STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103706587Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (232 aa)    
Predicted Functional Partners:
LOC103702547
NADPH:adrenodoxin oxidoreductase, mitochondrial.
    
 0.889
LOC103723460
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 0.849
LOC103705445
Photosystem I reaction center subunit III, chloroplastic.
   
 
 0.837
LOC103722808
LOW QUALITY PROTEIN: protein NAR1; Belongs to the NARF family.
    
 
 0.831
LOC103697036
Photosystem I reaction center subunit IV, chloroplastic-like.
   
 
 0.825
LOC103710511
Photosystem I reaction center subunit psaK, chloroplastic.
   
 
 0.796
LOC103713070
Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
   
 
 0.780
LOC103716456
Photosystem I reaction center subunit II, chloroplastic-like.
   
 
 0.774
LOC103723232
Divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic.
    
 
 0.745
LOC103710540
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 
 0.735
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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