STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103706878Protein GRIP isoform X1. (815 aa)    
Predicted Functional Partners:
LOC103699895
Nuclear pore protein.
   
 0.950
LOC103706514
Nuclear pore complex protein NUP54.
   
 0.935
LOC103695898
Nuclear pore complex protein NUP155.
  
 0.927
LOC103706809
Nuclear pore complex protein NUP155-like isoform X1.
  
 0.925
LOC103701958
LOW QUALITY PROTEIN: RAN GTPase-activating protein 1-like.
   
 0.910
LOC103716294
RAN GTPase-activating protein 2-like.
   
 0.910
LOC103705613
Nuclear pore complex protein NUP88 isoform X1.
  
 
 0.904
LOC103696902
LOW QUALITY PROTEIN: nuclear pore complex protein NUP205.
   
 0.902
LOC103695903
Protein SEH1 isoform X1; Belongs to the WD repeat SEC13 family.
   
 0.884
LOC103715534
Nuclear pore complex protein NUP160.
   
 0.876
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.