LOC103706806 protein (Phoenix dactylifera) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

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Score

LOC103706806

Centromere protein V. (143 aa)

Predicted Functional Partners:

LOC103699386

0.652

LOC103699526

0.652

LOC103704852

0.652

LOC103711045

0.652

ADH

0.652

LOC103712466

0.652

LOC103713788

0.652

LOC103717164

0.652

LOC103717967

0.652

LOC103722920

0.652

Your Current Organism:

Phoenix dactylifera

NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADH	LOC103706806	A0A2H3Y9C5	A0A2H3XVS2	Alcohol dehydrogenase 3.	Centromere protein V.	0.652
LOC103699386	LOC103706806	A0A2H3X7P5	A0A2H3XVS2	Alcohol dehydrogenase class-3-like.	Centromere protein V.	0.652
LOC103699526	LOC103706806	A0A2H3X822	A0A2H3XVS2	Alcohol dehydrogenase class-3-like.	Centromere protein V.	0.652
LOC103704852	LOC103706806	A0A2H3XP76	A0A2H3XVS2	Alcohol dehydrogenase 1.	Centromere protein V.	0.652
LOC103706806	ADH	A0A2H3XVS2	A0A2H3Y9C5	Centromere protein V.	Alcohol dehydrogenase 3.	0.652
LOC103706806	LOC103699386	A0A2H3XVS2	A0A2H3X7P5	Centromere protein V.	Alcohol dehydrogenase class-3-like.	0.652
LOC103706806	LOC103699526	A0A2H3XVS2	A0A2H3X822	Centromere protein V.	Alcohol dehydrogenase class-3-like.	0.652
LOC103706806	LOC103704852	A0A2H3XVS2	A0A2H3XP76	Centromere protein V.	Alcohol dehydrogenase 1.	0.652
LOC103706806	LOC103711045	A0A2H3XVS2	A0A2H3Y8Z2	Centromere protein V.	Alcohol dehydrogenase 3-like.	0.652
LOC103706806	LOC103712466	A0A2H3XVS2	A0A2H3YDQ1	Centromere protein V.	Alcohol dehydrogenase-like 6.	0.652
LOC103706806	LOC103713788	A0A2H3XVS2	A0A2H3YHV5	Centromere protein V.	Alcohol dehydrogenase 3-like.	0.652
LOC103706806	LOC103717164	A0A2H3XVS2	A0A2H3YUE5	Centromere protein V.	Uncharacterized protein LOC103717164.	0.652
LOC103706806	LOC103717967	A0A2H3XVS2	A0A2H3YWQ4	Centromere protein V.	Alcohol dehydrogenase-like 7 isoform X1.	0.652
LOC103706806	LOC103722920	A0A2H3XVS2	A0A2H3ZCW8	Centromere protein V.	Alcohol dehydrogenase-like 4 isoform X1.	0.652
LOC103711045	LOC103706806	A0A2H3Y8Z2	A0A2H3XVS2	Alcohol dehydrogenase 3-like.	Centromere protein V.	0.652
LOC103712466	LOC103706806	A0A2H3YDQ1	A0A2H3XVS2	Alcohol dehydrogenase-like 6.	Centromere protein V.	0.652
LOC103712466	LOC103717967	A0A2H3YDQ1	A0A2H3YWQ4	Alcohol dehydrogenase-like 6.	Alcohol dehydrogenase-like 7 isoform X1.	0.902
LOC103712466	LOC103722920	A0A2H3YDQ1	A0A2H3ZCW8	Alcohol dehydrogenase-like 6.	Alcohol dehydrogenase-like 4 isoform X1.	0.903
LOC103713788	LOC103706806	A0A2H3YHV5	A0A2H3XVS2	Alcohol dehydrogenase 3-like.	Centromere protein V.	0.652
LOC103717164	LOC103706806	A0A2H3YUE5	A0A2H3XVS2	Uncharacterized protein LOC103717164.	Centromere protein V.	0.652

page 1 of 2

Network Stats

number of nodes:

11

number of edges:

46

average node degree:

8.36

avg. local clustering coefficient:

0.917

expected number of edges:

14

PPI enrichment p-value:

2.83e-11

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006631

Fatty acid metabolic process

4 of 24

1.61

1.17

0.0030

GO:0019605

Butyrate metabolic process

2 of 2

2.39

0.84

0.0286

GO:0017000

Antibiotic biosynthetic process

3 of 17

1.64

0.77

0.0286

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0031177

Phosphopantetheine binding

3 of 3

2.39

1.74

0.00056

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1312

Mixed, incl. AMP-binding enzyme, and Butyrate metabolic process

7 of 10

2.24

5.06

1.07e-11

CL:1286

Mixed, incl. Fatty acid metabolism, and KR domain

8 of 23

1.93

4.31

1.07e-11

CL:1314

AMP-binding enzyme, and Polyketide synthase, ketoreductase domain

3 of 5

2.17

1.84

0.00028

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005777

Peroxisome

4 of 6

2.21

2.6

7.15e-06

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0596

Phosphopantetheine

2 of 4

2.09

0.74

0.0420

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF00550

Phosphopantetheine attachment site

5 of 8

2.19

3.27

2.05e-07

PF16197

Ketoacyl-synthetase C-terminal extension

3 of 3

2.39

1.96

0.00021

PF02801

Beta-ketoacyl synthase, C-terminal domain

3 of 4

2.27

1.9

0.00024

PF00109

Beta-ketoacyl synthase, N-terminal domain

3 of 4

2.27

1.9

0.00024

PF00501

AMP-binding enzyme

2 of 4

2.09

0.92

0.0190

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR036736

ACP-like superfamily

5 of 8

2.19

3.09

5.38e-07

IPR009081

Phosphopantetheine binding ACP domain

5 of 8

2.19

3.09

5.38e-07

IPR032821

Polyketide synthase, C-terminal extension

3 of 3

2.39

1.83

0.00037

IPR020841

Polyketide synthase, beta-ketoacyl synthase domain

3 of 4

2.27

1.75

0.00048

IPR018201

Beta-ketoacyl synthase, active site

3 of 4

2.27

1.75

0.00048

(more ...)

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00822

This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.

2 of 2

2.39

1.09

0.0097

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