STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103707035Protein RRP6-like 2. (945 aa)    
Predicted Functional Partners:
LOC103708016
Something about silencing protein 10.
   
 0.984
LOC103722158
Nuclear nucleic acid-binding protein C1D.
   
 0.983
LOC103706955
Exosome complex component CSL4 isoform X1.
   
 0.982
LOC103697132
Exosome complex component RRP45A-like.
   
 0.980
LOC103716117
U3 small nucleolar RNA-associated protein 18 homolog.
   
 0.980
LOC103719877
Exosome complex component RRP43 isoform X1.
   
 0.979
LOC103713483
Exosome complex component RRP41 homolog.
   
 0.978
LOC103695733
WD repeat-containing protein 3.
   
  0.977
LOC103696307
Exosome complex component RRP42.
   
 0.977
LOC103711632
Ribosome biogenesis protein BMS1 homolog.
   
 0.977
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.