STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103707196LOW QUALITY PROTEIN: tyrosyl-DNA phosphodiesterase 2-like. (402 aa)    
Predicted Functional Partners:
LOC103697899
ubiquitin-60S ribosomal protein L40.
   
   0.796
LOC103704542
ATP-dependent DNA helicase 2 subunit KU70 isoform X1.
     
 0.722
LOC103715924
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
  
 0.679
LOC103709637
ubiquitin-40S ribosomal protein S27a-like.
    
   0.673
LOC103701036
ubiquitin-40S ribosomal protein S27a.
    
   0.673
LOC103696584
ubiquitin-40S ribosomal protein S27a-like isoform X1.
    
   0.673
LOC103698228
DNA ligase 6-like isoform X1.
     
 0.669
LOC103705614
DNA ligase.
     
 0.669
LOC103718289
Origin of replication complex subunit 2.
      
 0.660
LOC103708242
ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase.
     
 0.655
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.