STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103707240Zinc finger CCCH domain-containing protein 4. (1023 aa)    
Predicted Functional Partners:
LOC103696901
Replication stress response regulator SDE2.
    
 0.848
LOC103701672
Calcium sensing receptor, chloroplastic.
    
 0.763
LOC103706378
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.763
LOC103714038
AP-2 complex subunit mu-like; Belongs to the adaptor complexes medium subunit family.
    
 0.763
LOC103708016
Something about silencing protein 10.
   
 0.758
LOC103716117
U3 small nucleolar RNA-associated protein 18 homolog.
   
 0.739
LOC103703619
Uncharacterized protein C57A7.06.
   
 0.735
LOC103723235
U3 small nucleolar RNA-associated protein 14-like.
   
 0.735
LOC103718939
pre-mRNA-splicing factor CWC25 homolog isoform X1.
   
 0.727
LOC103707616
Nucleolar protein 6.
   
 0.721
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.