STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103707988Mitochondrial Rho GTPase. (641 aa)    
Predicted Functional Partners:
LOC103723447
Glycine-rich cell wall structural protein 1-like.
   
 0.900
LOC103702498
Probable transmembrane GTPase FZO-like, chloroplastic isoform X2.
   
 0.858
LOC103701425
Kinesin-like protein KIN-14I isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.808
LOC103702248
Kinesin-like protein KIN-14I isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.808
LOC103717020
Cilia- and flagella-associated protein 20.
   
 
 0.794
LOC103710175
c-Myc-binding protein.
    
 
 0.759
LOC103702563
E3 ubiquitin-protein ligase KEG-like.
    
 0.660
LOC103716443
E3 ubiquitin-protein ligase KEG.
    
 0.660
LOC103707255
Ubiquitin carboxyl-terminal hydrolase 22.
     
 0.636
LOC103710115
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
     
 0.636
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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