STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103708244cysteine--tRNA ligase, chloroplastic/mitochondrial-like. (524 aa)    
Predicted Functional Partners:
LOC103718646
Uncharacterized protein LOC103718646 isoform X1.
  
  
 0.949
LOC103717659
Elongation factor 1-gamma 2-like.
   
 0.940
LOC103706535
cysteine--tRNA ligase, chloroplastic/mitochondrial.
  
  
 
0.902
LOC103706087
Uncharacterized protein LOC103706087 isoform X1.
  
  
 0.886
LOC103698060
Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase isoform X1.
  
 
 0.853
LOC103712118
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.833
LOC103699290
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.826
LOC103723528
Probable methionine--tRNA ligase isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.823
LOC103714920
LOW QUALITY PROTEIN: probable methionine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.823
LOC103712563
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.818
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.