STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103708379Transcription factor MYBS3-like. (351 aa)    
Predicted Functional Partners:
LOC103701937
Heat shock 70 kDa protein 17.
   
 0.484
LOC103706392
TATA box-binding protein-associated factor RNA polymerase I subunit B.
    
 0.469
LOC103717559
SAGA-associated factor 29 homolog A-like.
    
 0.469
LOC103716447
Coiled-coil domain-containing protein 22 homolog.
    
 0.447
LOC103698518
Coiled-coil domain-containing protein 22 homolog.
    
 0.447
LOC103703741
Soluble inorganic pyrophosphatase isoform X1.
      
 0.431
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.