STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103708876LOB domain-containing protein 15-like. (202 aa)    
Predicted Functional Partners:
LOC103696571
Uncharacterized protein LOC103696571.
   
 0.894
LOC103705948
Uncharacterized protein LOC103705948.
   
 0.894
LOC103702179
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 0.851
LOC103710589
Actin-related protein 2/3 complex subunit 4; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament; Belongs to the ARPC4 family.
    
 
 0.755
LOC103711151
Uncharacterized protein LOC103711151.
    
 
 0.755
LOC103704332
recQ-mediated genome instability protein 1.
    
 0.753
LOC103705658
Crossover junction endonuclease MUS81.
   
 0.732
LOC103704737
DNA replication ATP-dependent helicase/nuclease DNA2.
   
 
 0.711
LOC103717364
DNA excision repair protein ERCC-1.
   
 0.680
LOC103703711
Fanconi anemia group I protein isoform X1.
     
 0.652
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.