LOC103709238 protein (Phoenix dactylifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103709238

Uncharacterized protein LOC103709238 isoform X1. (1851 aa)

Predicted Functional Partners:

LOC103719956

0.706

LOC103706113

0.706

LOC103711711

0.625

LOC103721718

0.625

LOC103697013

0.581

LOC103704066

0.581

LOC103722941

0.581

LOC103719400

0.562

LOC103699579

0.561

LOC103711581

0.561

Your Current Organism:

Phoenix dactylifera

NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103697013	LOC103699579	A0A2H3X1Q7	A0A2H3X843	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Ornithine carbamoyltransferase, chloroplastic.	0.875
LOC103697013	LOC103704066	A0A2H3X1Q7	A0A2H3XLJ9	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.928
LOC103697013	LOC103706113	A0A2H3X1Q7	A0A3Q0HZR8	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Starch synthase 3, chloroplastic/amyloplastic.	0.921
LOC103697013	LOC103709238	A0A2H3X1Q7	A0A2H3Y317	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Uncharacterized protein LOC103709238 isoform X1.	0.581
LOC103697013	LOC103711581	A0A2H3X1Q7	A0A2H3ZSL3	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Ornithine carbamoyltransferase, chloroplastic-like.	0.875
LOC103697013	LOC103711711	A0A2H3X1Q7	A0A2H3YB58	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	4-alpha-glucanotransferase DPE2.	0.992
LOC103697013	LOC103719400	A0A2H3X1Q7	A0A2H3Z139	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.	0.420
LOC103697013	LOC103719956	A0A2H3X1Q7	A0A2H3Z326	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Glycogen synthase isoform X1.	0.920
LOC103697013	LOC103721718	A0A2H3X1Q7	A0A2H3Z9M8	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	4-alpha-glucanotransferase.	0.997
LOC103697013	LOC103722941	A0A2H3X1Q7	A0A2H4A120	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.905
LOC103699579	LOC103697013	A0A2H3X843	A0A2H3X1Q7	Ornithine carbamoyltransferase, chloroplastic.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.875
LOC103699579	LOC103704066	A0A2H3X843	A0A2H3XLJ9	Ornithine carbamoyltransferase, chloroplastic.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.875
LOC103699579	LOC103706113	A0A2H3X843	A0A3Q0HZR8	Ornithine carbamoyltransferase, chloroplastic.	Starch synthase 3, chloroplastic/amyloplastic.	0.975
LOC103699579	LOC103709238	A0A2H3X843	A0A2H3Y317	Ornithine carbamoyltransferase, chloroplastic.	Uncharacterized protein LOC103709238 isoform X1.	0.561
LOC103699579	LOC103711581	A0A2H3X843	A0A2H3ZSL3	Ornithine carbamoyltransferase, chloroplastic.	Ornithine carbamoyltransferase, chloroplastic-like.	0.950
LOC103699579	LOC103711711	A0A2H3X843	A0A2H3YB58	Ornithine carbamoyltransferase, chloroplastic.	4-alpha-glucanotransferase DPE2.	0.551
LOC103699579	LOC103719956	A0A2H3X843	A0A2H3Z326	Ornithine carbamoyltransferase, chloroplastic.	Glycogen synthase isoform X1.	0.975
LOC103699579	LOC103721718	A0A2H3X843	A0A2H3Z9M8	Ornithine carbamoyltransferase, chloroplastic.	4-alpha-glucanotransferase.	0.551
LOC103699579	LOC103722941	A0A2H3X843	A0A2H4A120	Ornithine carbamoyltransferase, chloroplastic.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.875
LOC103704066	LOC103697013	A0A2H3XLJ9	A0A2H3X1Q7	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.928