STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103709242COBW domain-containing protein 1. (383 aa)    
Predicted Functional Partners:
LOC103715470
Uncharacterized protein LOC103715470.
  
  
 0.667
LOC103716430
Magnesium-chelatase subunit ChlH, chloroplastic.
  
  
 0.620
LOC103712707
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
  
 0.608
LOC103696313
54S ribosomal protein L24, mitochondrial-like.
  
  
 0.590
LOC103706942
50S ribosomal protein L28, chloroplastic.
  
  
 0.590
LOC103709972
54S ribosomal protein L24, mitochondrial-like.
  
  
 0.590
LOC108511217
40S ribosomal protein S29.
  
 
 0.548
LOC108511225
40S ribosomal protein S29-like.
  
 
 0.548
LOC108511943
40S ribosomal protein S29 isoform X2.
  
 
 0.548
LOC103707805
Uncharacterized protein LOC103707805.
  
 
 0.547
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.