STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103709288Ran-binding protein 1 homolog b-like. (221 aa)    
Predicted Functional Partners:
LOC103699895
Nuclear pore protein.
   
 0.950
LOC103706514
Nuclear pore complex protein NUP54.
   
 0.935
LOC103701958
LOW QUALITY PROTEIN: RAN GTPase-activating protein 1-like.
   
 0.910
LOC103716294
RAN GTPase-activating protein 2-like.
   
 0.910
LOC103696902
LOW QUALITY PROTEIN: nuclear pore complex protein NUP205.
   
 0.902
LOC103695903
Protein SEH1 isoform X1; Belongs to the WD repeat SEC13 family.
   
 0.884
LOC103705613
Nuclear pore complex protein NUP88 isoform X1.
    
 0.882
LOC103715534
Nuclear pore complex protein NUP160.
   
 0.876
LOC103695898
Nuclear pore complex protein NUP155.
   
 0.872
LOC103706809
Nuclear pore complex protein NUP155-like isoform X1.
   
 0.872
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.