STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103709597Endoribonuclease Dicer homolog 3a-like; Belongs to the helicase family. Dicer subfamily. (1655 aa)    
Predicted Functional Partners:
LOC103721051
39S ribosomal protein L46, mitochondrial.
   
 
 0.844
LOC103715470
Uncharacterized protein LOC103715470.
   
 
 0.834
LOC103711426
28S ribosomal protein S29, mitochondrial.
   
 
 0.801
LOC103701946
54S ribosomal protein L51, mitochondrial.
   
 
 0.799
LOC103711255
Uncharacterized protein LOC103711255.
   
 
 0.795
LOC103720962
Uncharacterized protein LOC103720962.
   
   0.777
LOC103703492
30S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.772
LOC103712302
30S ribosomal protein S9, chloroplastic; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.772
LOC103718685
Uncharacterized protein LOC103718685.
   
 
 0.738
LOC103704671
50S ribosomal protein L19-1, chloroplastic-like.
  
 
 0.736
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.