STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103709878Calcium-binding protein PBP1-like. (119 aa)    
Predicted Functional Partners:
LOC103717331
DNA repair protein RAD4.
    
 0.917
LOC103701425
Kinesin-like protein KIN-14I isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.794
LOC103702248
Kinesin-like protein KIN-14I isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.794
LOC103710005
Enhanced ethylene response protein 5.
    
 
 0.700
LOC103710934
SAC3 family protein B isoform X1.
    
 
 0.691
LOC103711703
SAC3 family protein C isoform X1.
    
 
 0.691
LOC103722997
cyclin-H1-1 isoform X1; Belongs to the cyclin family.
   
 0.660
LOC103718149
LOW QUALITY PROTEIN: general transcription and DNA repair factor IIH helicase subunit XPD.
    
 0.648
LOC103712337
Cyclin-dependent kinase D-1-like; Belongs to the protein kinase superfamily.
    
 0.639
LOC103716019
General transcription and DNA repair factor IIH subunit TFB4 isoform X1.
    
 0.636
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.