STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103710057caffeoyl-CoA O-methyltransferase-like. (247 aa)    
Predicted Functional Partners:
LOC103723569
Chalcone synthase-like; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
     
 0.810
LOC103717120
4-coumarate--CoA ligase 2.
   
 0.807
LOC103708041
4-coumarate--CoA ligase-like 6 isoform X1.
    
 0.796
LOC103720770
4-coumarate--CoA ligase-like 1.
    
 0.796
LOC103716997
Caffeic acid 3-O-methyltransferase-like; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family.
   
  
 0.788
LOC103720909
4-coumarate--CoA ligase-like 1.
    
 0.780
LOC103707448
Hydroxycinnamoyltransferase 1 isoform X1.
   
 
 0.778
LOC103720326
Chalcone synthase C2; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
     
 0.775
LOC103720741
LOW QUALITY PROTEIN: chalcone synthase 3; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
     
 0.775
LOC103720740
LOW QUALITY PROTEIN: chalcone synthase 3; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
     
 0.775
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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