STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103710614LOW QUALITY PROTEIN: UDP-glucuronate 4-epimerase 6-like. (468 aa)    
Predicted Functional Partners:
LOC103713110
UDP-sugar pyrophosphorylase.
    
 0.961
LOC103717980
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.923
LOC103698058
UDP-D-apiose/UDP-D-xylose synthase 2.
    
 0.921
LOC103698152
UDP-D-apiose/UDP-D-xylose synthase 2-like.
    
 0.921
LOC103723042
ADP-glucose phosphorylase.
  
 0.836
LOC103697451
Uncharacterized protein LOC103697451 isoform X1.
  
 0.836
LOC103695691
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
   
 
 0.822
LOC103709625
Venom phosphodiesterase 2-like.
     
  0.800
LOC103704794
Probable sucrose-phosphate synthase 4.
    
 0.754
LOC103717684
Sucrose synthase; Sucrose-cleaving enzyme that provides UDP-glucose and fructose for various metabolic pathways. Belongs to the glycosyltransferase 1 family. Plant sucrose synthase subfamily.
    
 0.732
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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