STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103710722Serine/threonine-protein kinase BSK1-2-like isoform X1. (142 aa)    
Predicted Functional Partners:
LOC103696082
Putative acyl-activating enzyme 19.
  
 0.777
LOC103699895
Nuclear pore protein.
   
 0.589
LOC103696902
LOW QUALITY PROTEIN: nuclear pore complex protein NUP205.
   
 0.583
LOC103710781
Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
  0.572
LOC103695440
Mediator of RNA polymerase II transcription subunit 6.
    
 0.567
LOC103714702
Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery.
    
 0.556
LOC103715107
Electron transfer flavoprotein subunit alpha, mitochondrial.
  
 
 0.546
LOC103706514
Nuclear pore complex protein NUP54.
    
 0.545
LOC103701673
Probable acyl-activating enzyme 17, peroxisomal.
  
 
 0.521
LOC103706689
Probable acyl-activating enzyme 18, peroxisomal isoform X1.
  
 
 0.521
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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