STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103710898Probable chlorophyll(Ide) b reductase NYC1, chloroplastic isoform X1. (533 aa)    
Predicted Functional Partners:
LOC103702743
LOW QUALITY PROTEIN: chlorophyllide a oxygenase, chloroplastic.
    
 0.963
LOC103711882
7-hydroxymethyl chlorophyll a reductase, chloroplastic isoform X1.
    
 0.956
LOC103709366
Chlorophyll synthase, chloroplastic.
   
 0.955
LOC103697059
chlorophyll(Ide) b reductase NOL, chloroplastic; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
0.939
LOC103705552
Chlorophyllase-1.
    
 0.904
LOC103695966
Chlorophyllase-2, chloroplastic.
     
  0.900
LOC103723245
Pheophorbide a oxygenase, chloroplastic.
  
 
 0.676
LOC103697115
Magnesium protoporphyrin IX methyltransferase, chloroplastic.
   
 0.674
LOC103701887
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.639
LOC103704597
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.639
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.