STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103711437Squalene synthase-like isoform X1. (408 aa)    
Predicted Functional Partners:
LOC103707523
Squalene monooxygenase.
  
 
 0.989
LOC103713674
Squalene monooxygenase-like.
  
 
 0.989
LOC103709296
Farnesyl pyrophosphate synthase 1-like isoform X1; Belongs to the FPP/GGPP synthase family.
  
 0.938
LOC103708154
Farnesyl pyrophosphate synthase-like isoform X1; Belongs to the FPP/GGPP synthase family.
  
 0.938
LOC103698354
Geranylgeranyl pyrophosphate synthase 7, chloroplastic-like; Belongs to the FPP/GGPP synthase family.
  
 0.935
LOC103704346
Geranylgeranyl pyrophosphate synthase 7, chloroplastic-like; Belongs to the FPP/GGPP synthase family.
  
 0.930
LOC103723798
Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic; Belongs to the FPP/GGPP synthase family.
  
 0.928
LOC103708119
Obtusifoliol 14-alpha demethylase-like; Belongs to the cytochrome P450 family.
 
 
 0.927
LOC103697889
LOW QUALITY PROTEIN: obtusifoliol 14-alpha demethylase-like; Belongs to the cytochrome P450 family.
 
 
 0.920
LOC103714132
LOW QUALITY PROTEIN: alpha-humulene synthase-like.
     
 0.911
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.