STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103711504CBS domain-containing protein CBSX1, chloroplastic-like isoform X1. (240 aa)    
Predicted Functional Partners:
LOC103698548
LOW QUALITY PROTEIN: uncharacterized protein LOC103698548.
  
 0.615
LOC103705543
Uncharacterized protein LOC103705543.
  
 0.615
LOC103707253
Gamma-glutamyl peptidase 3-like.
  
 
 0.541
LOC103709804
Gamma-glutamyl peptidase 3-like isoform X1.
  
 
 0.541
LOC103710194
Gamma-glutamyl peptidase 5-like.
  
 
 0.541
LOC103715833
Phosphoglucan phosphatase LSF1, chloroplastic isoform X1.
   
 0.531
LOC103715072
Beclin-1-like protein.
   
 
  0.521
LOC103699007
Uncharacterized protein LOC103699007.
  
 
 0.516
LOC103699149
Uncharacterized protein LOC103699149.
  
 
 0.516
LOC103721254
Urease accessory protein D.
  
 
 0.516
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.