STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103712227Uncharacterized protein LOC103712227. (233 aa)    
Predicted Functional Partners:
LOC103714673
Uncharacterized protein LOC103714673.
   
  
 0.578
LOC103718208
Protein CHLORORESPIRATORY REDUCTION 7, chloroplastic.
   
  
 0.570
LOC103711392
Photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1.
   
  
 0.546
LOC103702836
Photosynthetic NDH subunit of subcomplex B 4, chloroplastic isoform X1.
   
  
 0.544
LOC103723625
NAD(P)H-quinone oxidoreductase subunit L, chloroplastic.
   
  
 0.542
LOC103705916
NAD(P)H-quinone oxidoreductase subunit N, chloroplastic.
   
  
 0.541
LOC103717288
Photosynthetic NDH subunit of subcomplex B 3, chloroplastic isoform X1.
   
  
 0.541
LOC103698435
LOW QUALITY PROTEIN: photosynthetic NDH subunit of lumenal location 3, chloroplastic-like.
   
  
 0.536
LOC103695762
Photosynthetic NDH subunit of subcomplex B 5, chloroplastic.
      
 0.516
LOC103720560
Photosynthetic NDH subunit of subcomplex B 2, chloroplastic.
      
 0.515
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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