STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103712318Serine/threonine-protein kinase EDR1-like. (1003 aa)    
Predicted Functional Partners:
LOC103716982
DEAD-box ATP-dependent RNA helicase 36 isoform X1; Belongs to the DEAD box helicase family.
    
 0.542
LOC103715780
Tetratricopeptide repeat protein 1.
    
 
 0.516
LOC103701258
Auxin transporter-like protein 3.
    
 0.464
LOC103695597
Hexose carrier protein HEX6-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 
 0.410
LOC103717285
Hexose carrier protein HEX6-like; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 
 0.410
LOC103703909
E3 ubiquitin-protein ligase PRT1.
   
 0.406
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.