LOC103712507 protein (Phoenix dactylifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103712507

Heat stress transcription factor B-1-like. (320 aa)

Predicted Functional Partners:

LOC103695585

0.591

LOC103720578

0.513

LOC103701937

0.464

LOC103701676

0.431

LOC103707122

0.431

LOC103710313

0.418

LOC103696345

0.412

LOC103722381

0.412

LOC103722384

0.412

LOC103706334

0.400

Your Current Organism:

Phoenix dactylifera

NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103695585	LOC103710313	A0A2H3WXG0	A0A2H3Y6X2	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	MADS-box transcription factor 14-like.	0.404
LOC103695585	LOC103712507	A0A2H3WXG0	A0A2H3YE32	Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.	Heat stress transcription factor B-1-like.	0.591
LOC103696345	LOC103701676	A0A2H3WZR6	A0A2H3XDE4	Heat shock protein 81-1.	Heat shock factor-binding protein.	0.457
LOC103696345	LOC103701937	A0A2H3WZR6	A0A2H3XE91	Heat shock protein 81-1.	Heat shock 70 kDa protein 17.	0.848
LOC103696345	LOC103707122	A0A2H3WZR6	A0A2H3XWS9	Heat shock protein 81-1.	Heat shock factor-binding protein-like isoform X1.	0.457
LOC103696345	LOC103712507	A0A2H3WZR6	A0A2H3YE32	Heat shock protein 81-1.	Heat stress transcription factor B-1-like.	0.412
LOC103701676	LOC103696345	A0A2H3XDE4	A0A2H3WZR6	Heat shock factor-binding protein.	Heat shock protein 81-1.	0.457
LOC103701676	LOC103701937	A0A2H3XDE4	A0A2H3XE91	Heat shock factor-binding protein.	Heat shock 70 kDa protein 17.	0.444
LOC103701676	LOC103706334	A0A2H3XDE4	A0A2H3XTL9	Heat shock factor-binding protein.	Endoplasmin homolog.	0.423
LOC103701676	LOC103712507	A0A2H3XDE4	A0A2H3YE32	Heat shock factor-binding protein.	Heat stress transcription factor B-1-like.	0.431
LOC103701676	LOC103722381	A0A2H3XDE4	A0A2H3ZBS1	Heat shock factor-binding protein.	Heat shock protein 81-1-like.	0.457
LOC103701676	LOC103722384	A0A2H3XDE4	A0A2H3ZBV8	Heat shock factor-binding protein.	Heat shock protein 81-1-like.	0.457
LOC103701937	LOC103696345	A0A2H3XE91	A0A2H3WZR6	Heat shock 70 kDa protein 17.	Heat shock protein 81-1.	0.848
LOC103701937	LOC103701676	A0A2H3XE91	A0A2H3XDE4	Heat shock 70 kDa protein 17.	Heat shock factor-binding protein.	0.444
LOC103701937	LOC103706334	A0A2H3XE91	A0A2H3XTL9	Heat shock 70 kDa protein 17.	Endoplasmin homolog.	0.969
LOC103701937	LOC103707122	A0A2H3XE91	A0A2H3XWS9	Heat shock 70 kDa protein 17.	Heat shock factor-binding protein-like isoform X1.	0.444
LOC103701937	LOC103712507	A0A2H3XE91	A0A2H3YE32	Heat shock 70 kDa protein 17.	Heat stress transcription factor B-1-like.	0.464
LOC103701937	LOC103722381	A0A2H3XE91	A0A2H3ZBS1	Heat shock 70 kDa protein 17.	Heat shock protein 81-1-like.	0.848
LOC103701937	LOC103722384	A0A2H3XE91	A0A2H3ZBV8	Heat shock 70 kDa protein 17.	Heat shock protein 81-1-like.	0.848
LOC103706334	LOC103701676	A0A2H3XTL9	A0A2H3XDE4	Endoplasmin homolog.	Heat shock factor-binding protein.	0.423