STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103712915Signal peptidase complex subunit 3; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum. Belongs to the SPCS3 family. (167 aa)    
Predicted Functional Partners:
LOC103703906
Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.
   
 0.962
LOC103708151
Probable signal peptidase complex subunit 1.
   
 0.909
LOC103709298
Probable signal peptidase complex subunit 1.
   
 0.909
LOC103706168
Signal peptidase I.
   
 0.837
LOC103720463
Signal peptidase I.
   
 0.837
LOC103720620
Signal peptidase I.
   
 0.837
LOC103709189
Probable thylakoidal processing peptidase 2, chloroplastic.
    
 0.611
LOC103710906
LOW QUALITY PROTEIN: chloroplast processing peptidase.
    
 0.611
LOC103714823
Mitochondrial inner membrane protease subunit 1 isoform X1.
    
 0.611
LOC103721635
Mitochondrial inner membrane protease subunit 2 isoform X1.
    
 0.611
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.