STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103713361Cytochrome b561 and DOMON domain-containing protein At4g17280-like. (188 aa)    
Predicted Functional Partners:
LOC103711255
Uncharacterized protein LOC103711255.
   
 
 0.694
LOC103721051
39S ribosomal protein L46, mitochondrial.
   
   0.678
LOC103696807
50S ribosomal protein L3-1, chloroplastic; Belongs to the universal ribosomal protein uL3 family.
   
   0.595
LOC103707681
50S ribosomal protein L3-2, chloroplastic; Belongs to the universal ribosomal protein uL3 family.
   
   0.595
LOC103720962
Uncharacterized protein LOC103720962.
   
   0.593
LOC103715470
Uncharacterized protein LOC103715470.
   
   0.567
LOC103701946
54S ribosomal protein L51, mitochondrial.
    
   0.550
LOC103720772
Uncharacterized protein LOC103720772; Belongs to the universal ribosomal protein uS5 family.
   
   0.544
LOC103696313
54S ribosomal protein L24, mitochondrial-like.
   
 
 0.528
LOC103709972
54S ribosomal protein L24, mitochondrial-like.
   
 
 0.528
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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