STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103713606Blue copper protein-like. (189 aa)    
Predicted Functional Partners:
ndhG
NAD(P)H-quinone oxidoreductase subunit 6, chloroplastic; NDH shuttles electrons from NAD(P)H:plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.
    
   0.568
LOC103723447
Glycine-rich cell wall structural protein 1-like.
    
 0.560
LOC103707930
Pathogenesis-related protein 1-like; Belongs to the BetVI family.
      
 0.511
LOC103698435
LOW QUALITY PROTEIN: photosynthetic NDH subunit of lumenal location 3, chloroplastic-like.
    
   0.499
LOC103710938
Uncharacterized protein LOC103710938.
    
 0.491
LOC103695762
Photosynthetic NDH subunit of subcomplex B 5, chloroplastic.
    
 
 0.464
LOC103708495
NAD(P)H-quinone oxidoreductase subunit M, chloroplastic.
    
 
 0.457
LOC103705916
NAD(P)H-quinone oxidoreductase subunit N, chloroplastic.
   
   0.454
LOC103723625
NAD(P)H-quinone oxidoreductase subunit L, chloroplastic.
   
   0.454
LOC103702836
Photosynthetic NDH subunit of subcomplex B 4, chloroplastic isoform X1.
    
 
 0.453
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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