STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103713441Pentatricopeptide repeat-containing protein At1g51965, mitochondrial. (650 aa)    
Predicted Functional Partners:
nad2
NADH dehydrogenase subunit 2.
    
 
 0.547
LOC103698269
Transcription termination factor MTERF15, mitochondrial.
    
 
 0.525
LOC103701584
Nuclear intron maturase 1, mitochondrial.
      
 0.516
LOC103704634
Nuclear intron maturase 2, mitochondrial.
      
 0.516
LOC103712774
Nuclear intron maturase 4, mitochondrial.
      
 0.516
LOC103697896
LOW QUALITY PROTEIN: protein WHAT'S THIS FACTOR 1.
      
 0.515
LOC103721456
Regulator of chromosome condensation-like.
      
 0.506
LOC103723438
RCC1 domain-containing protein RUG3, mitochondrial-like isoform X1.
      
 0.506
LOC103716631
DNA repair RAD52-like protein 1, mitochondrial.
      
 0.501
LOC103698054
DExH-box ATP-dependent RNA helicase DExH3-like.
    
 
 0.426
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.