STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103713931Omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like. (394 aa)    
Predicted Functional Partners:
LOC103724048
Integrator complex subunit 9 homolog isoform X1.
    
 0.575
LOC103706807
Cleavage and polyadenylation specificity factor subunit 3-II.
    
 0.554
LOC103710110
Protein SIEL isoform X1.
    
 0.546
LOC103714943
Integrator complex subunit 3.
    
 0.543
LOC103723653
3-ketoacyl-CoA synthase.
    
 0.533
LOC103714559
Glycerol-3-phosphate acyltransferase, chloroplastic.
   
 
 0.524
LOC103708772
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
      
 0.513
LOC103720930
Fatty acid desaturase 4, chloroplastic-like.
      
 0.513
LOC103716076
Diacylglycerol O-acyltransferase 2D.
   
  
 0.510
LOC103714894
3-ketoacyl-CoA thiolase 2, peroxisomal-like; Belongs to the thiolase-like superfamily. Thiolase family.
      
 0.509
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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