STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103714246Glycerophosphodiester phosphodiesterase GDPDL7-like. (760 aa)    
Predicted Functional Partners:
LOC103695978
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.755
LOC103705022
L-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X1.
    
 0.655
LOC103705847
LOW QUALITY PROTEIN: histidinol-phosphate aminotransferase, chloroplastic-like.
    
  0.463
LOC103700508
Nodulin-related protein 1-like.
  
  
 0.430
LOC103710224
Nodulin-related protein 1.
  
  
 0.430
LOC103698889
Glycerol kinase-like isoform X2.
  
 
 0.412
LOC103700800
26S proteasome regulatory subunit 7A; Belongs to the AAA ATPase family.
  
 
 0.412
LOC103701169
Katanin p60 ATPase-containing subunit A-like 2 isoform X1.
  
 
 0.412
LOC103704037
26S proteasome regulatory subunit 8 homolog A; Belongs to the AAA ATPase family.
  
 
 0.412
LOC103707093
FGGY carbohydrate kinase domain-containing protein isoform X1.
  
 
 0.412
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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