STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103714360Protein FLC EXPRESSOR-like. (318 aa)    
Predicted Functional Partners:
LOC103720206
Transcription initiation factor TFIID subunit 15b.
     
 0.516
LOC103723336
Protein SUPPRESSOR OF FRI 4 isoform X1.
      
 0.516
LOC103700864
FRIGIDA-like protein; Belongs to the Frigida family.
      
 0.505
LOC103724266
FRIGIDA-like protein; Belongs to the Frigida family.
      
 0.505
LOC103697555
Zinc finger CCCH domain-containing protein 36-like isoform X1.
    
 0.460
LOC103707145
Zinc finger CCCH domain-containing protein 36-like.
    
 0.460
LOC103699137
Uncharacterized protein LOC103699137.
    
 0.451
LOC103713897
Uncharacterized protein LOC103713897 isoform X1.
    
 0.451
LOC103705958
FRIGIDA-like protein; Belongs to the Frigida family.
    
 0.430
LOC108511275
FRIGIDA-like protein; Belongs to the Frigida family.
    
 0.430
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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