STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103714611Indole-3-acetic acid-amido synthetase GH3.10. (598 aa)    
Predicted Functional Partners:
LOC103701258
Auxin transporter-like protein 3.
      
 0.578
LOC103709149
Serine/threonine-protein kinase SAPK10-like isoform X1; Belongs to the protein kinase superfamily.
      
 0.519
LOC103709232
Serine/threonine-protein kinase SAPK10 isoform X1; Belongs to the protein kinase superfamily.
      
 0.519
LOC103719441
LOW QUALITY PROTEIN: ethylene-responsive transcription factor 1B-like.
      
 0.517
LOC103710774
Serine/threonine-protein kinase SAPK3-like; Belongs to the protein kinase superfamily.
      
 0.516
LOC103704620
LOW QUALITY PROTEIN: serine/threonine-protein kinase SAPK3-like; Belongs to the protein kinase superfamily.
      
 0.516
LOC103700886
Auxin transporter-like protein 2.
      
 0.499
LOC103706152
Auxin transporter-like protein 2.
      
 0.499
LOC103701276
Serine/threonine-protein kinase SAPK7; Belongs to the protein kinase superfamily.
      
 0.473
LOC103702675
Serine/threonine-protein kinase SAPK7-like; Belongs to the protein kinase superfamily.
      
 0.473
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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