STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103714820Zinc finger CCCH domain-containing protein 62-like. (496 aa)    
Predicted Functional Partners:
LOC103705932
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.
    
 0.792
LOC103723389
Serine--glyoxylate aminotransferase isoform X1.
  
 0.742
LOC103697899
ubiquitin-60S ribosomal protein L40.
   
 
 0.691
LOC103703898
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.683
LOC103698548
LOW QUALITY PROTEIN: uncharacterized protein LOC103698548.
    
 0.677
LOC103705543
Uncharacterized protein LOC103705543.
    
 0.677
LOC103711139
Dihydrodipicolinate reductase-like protein CRR1, chloroplastic isoform X1.
   
 
 0.670
LOC103715867
Malate synthase, glyoxysomal.
  
 
 0.654
LOC103705628
2-hydroxyacyl-CoA lyase-like; Belongs to the TPP enzyme family.
  
 
 0.643
LOC103713706
Acetolactate synthase.
  
 
 0.643
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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