STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC10371482240S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (307 aa)    
Predicted Functional Partners:
LOC103706732
40S ribosomal protein S28.
  
 0.995
LOC103697899
ubiquitin-60S ribosomal protein L40.
  
 0.994
LOC103717777
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.988
LOC103722763
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
  
 0.988
LOC103708272
40S ribosomal protein S13-like; Belongs to the universal ribosomal protein uS15 family.
  
 0.984
LOC103717397
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
  
 0.984
LOC103704049
Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 0.982
LOC103703492
30S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
  
 0.980
LOC103712302
30S ribosomal protein S9, chloroplastic; Belongs to the universal ribosomal protein uS9 family.
  
 0.980
LOC103702956
Uncharacterized protein LOC103702956.
  
 0.979
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.