STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103715182Glyceraldehyde-3-phosphate dehydrogenase 3, cytosolic-like; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (340 aa)    
Predicted Functional Partners:
LOC103717394
Transketolase, chloroplastic-like.
  
 
 0.962
LOC103719448
LOW QUALITY PROTEIN: transketolase, chloroplastic-like.
  
 
 0.962
LOC103723776
Transketolase, chloroplastic isoform X1.
  
 
 0.962
LOC103716485
Triosephosphate isomerase, cytosolic.
 
 0.945
LOC103721989
Triosephosphate isomerase, cytosolic.
 
 0.945
LOC103703497
Triosephosphate isomerase, cytosolic-like isoform X1.
 
 0.930
LOC103706349
Triosephosphate isomerase, chloroplastic.
 
 0.929
LOC103714060
Triosephosphate isomerase, chloroplastic-like.
 
 0.929
LOC103702710
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.927
LOC103721309
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.922
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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