STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103715189Kelch repeat-containing protein At3g27220-like. (423 aa)    
Predicted Functional Partners:
LOC103701097
BTB/POZ domain-containing protein At2g30600 isoform X1.
    
 0.447
LOC103707326
Low-temperature-induced cysteine proteinase-like; Belongs to the peptidase C1 family.
      
 0.431
LOC103720858
F-box/kelch-repeat protein At1g80440-like.
  
   
 0.431
LOC103705126
Probable aspartyl protease At4g16563; Belongs to the peptidase A1 family.
      
 0.416
LOC103706254
Pentatricopeptide repeat-containing protein At1g31920.
      
 0.416
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.