STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103715300Serine/arginine-rich-splicing factor SR34. (299 aa)    
Predicted Functional Partners:
LOC103707972
Serine/arginine-rich splicing factor SC35-like.
   
 0.893
LOC103716111
Serine/arginine-rich splicing factor SC35.
   
 0.893
LOC103701697
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.842
LOC103721496
Nuclear cap-binding protein subunit 2.
   
 0.839
LOC103701094
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
   
 0.832
LOC103695637
Zinc finger CCCH domain-containing protein 45-like isoform X2.
   
 0.807
LOC103713836
Zinc finger CCCH domain-containing protein 45-like.
   
 0.807
LOC103710941
Serine/arginine-rich SC35-like splicing factor SCL28.
    
 0.802
LOC103716484
Serine/arginine-rich SC35-like splicing factor SCL30 isoform X1.
   
 0.801
LOC103709610
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.
    
 0.798
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.