STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103715160Sec-independent protein translocase protein TATC, chloroplastic-like. (343 aa)    
Predicted Functional Partners:
LOC103704530
Sec-independent protein translocase protein TATA, chloroplastic-like.
  
 0.973
LOC103705988
Sec-independent protein translocase protein TATA, chloroplastic-like.
  
 0.973
LOC103718024
Sec-independent protein translocase protein TATA, chloroplastic-like.
  
 0.973
LOC103705632
Sec-independent protein translocase protein TATC, chloroplastic isoform X1.
  
  
 
0.900
LOC103713612
Trigger factor-like protein TIG, Chloroplastic isoform X1.
     
 0.567
cox3
Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.
     
 0.551
LOC103718063
Signal recognition particle receptor subunit alpha-like.
     
 0.527
LOC103710305
Signal recognition particle receptor subunit alpha-like.
     
 0.527
ccsA
Cytochrome c biogenesis protein CcsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
     
 0.521
atpA
ATP synthase subunit alpha, chloroplastic; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
      
 0.499
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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