STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103715539Uncharacterized protein LOC103715539 isoform X1. (428 aa)    
Predicted Functional Partners:
LOC103711426
28S ribosomal protein S29, mitochondrial.
    
   0.909
LOC103720772
Uncharacterized protein LOC103720772; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.893
LOC103702956
Uncharacterized protein LOC103702956.
    
 
 0.869
LOC103707061
Uncharacterized protein LOC103707061.
    
 
 0.869
LOC103703492
30S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.866
LOC103712302
30S ribosomal protein S9, chloroplastic; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.866
rps2
30S ribosomal protein S2, chloroplastic.
    
 
 0.850
rps2-2
Ribosomal protein S2.
    
 
 0.850
LOC103695449
Rsm22-cox11 tandem protein 2, mitochondrial isoform X1.
    
 
 0.841
LOC103697155
Uncharacterized protein LOC103697155.
   
 
 0.835
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.